{"id":225,"date":"2016-08-04T13:50:13","date_gmt":"2016-08-04T13:50:13","guid":{"rendered":"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/?page_id=225"},"modified":"2020-10-27T15:18:43","modified_gmt":"2020-10-27T19:18:43","slug":"biodiversity-and-ecosystem-function","status":"publish","type":"page","link":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/inference-module\/biodiversity-and-ecosystem-function\/","title":{"rendered":"Biodiversity &amp; ecosystem function"},"content":{"rendered":"<div id=\"pl-225\"  class=\"panel-layout\" ><div id=\"pg-225-0\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-225-0-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-0-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"0\" ><div class=\"textwidget\"><p>In this module, we will explore the links between biodiversity and the ecosystem. In doing this, we will also practice methods of scientific inquiry, moving from theory or observation to a question and hypothesis and the design of an experiment. We will begin with discussions of BEF, including a history of the field and the controversies surrounding it. Then we then analyze a long-term dataset from the Cedar Creek Biodiversity Experiment.<\/p>\n<p>&nbsp;<\/p>\n<p>In teams, you will formulate a question and hypothesis and analyze the data. Did you find support for your hypothesis? What new question has arisen through your analysis? What kind of data would you need to answer this question? You will then propose an experiment or observational study in order to answer this question. At the end of the module, you will present your journey, and how you progressed from a question, theory or observation to a new question and a proposed experiment or observational study. Details of the module are below.<\/p>\n<p>&nbsp;<\/p>\n<p><strong>BEF Module Assignment <\/strong><\/p>\n<p><strong>\u00a0<\/strong><\/p>\n<p><strong>Part 1.<\/strong><\/p>\n<p>In your group, discuss BEF theories and the controversies that surround them. What theory could you test with data from a long-term biodiversity experiment? How can you incorporate <strong>time<\/strong> into this consideration? For example, does a long-term dataset address any of the perceived concerns about BEF?<\/p>\n<p>&nbsp;<\/p>\n<p>Each group will:<\/p>\n<p>1) State a question and hypothesis<\/p>\n<p>2) Define an analytical approach<\/p>\n<p>3) Analyze data<\/p>\n<p>4) Present your results in a figure or figures<\/p>\n<p>5) Interpret your findings<\/p>\n<p>&nbsp;<\/p>\n<p>Data and Metadata:<\/p>\n<p>You have access to data from the Cedar Creek Biodiversity Experiment that spans 22 years. \u00a0There are two datasets, R code and metadata:<\/p>\n<p>&nbsp;<\/p>\n<p>Aboveground biomass \u2013 <a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/BIO_II_biomass.csv\">BIO_II_biomass<\/a><\/p>\n<p>Soil carbon \u2013 <a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/BIO_II_soil_carbon.csv\">BIO_II_soil_carbon<\/a><\/p>\n<p>Example code for analysis and graphing \u2013 <a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/Bio-II.txt\">Bio II<\/a><\/p>\n<p>BIO II METADATA for details \u2013 <a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/BIO-II-METADATA.xlsx\">BIO II METADATA<\/a><\/p>\n<p>&nbsp;<\/p>\n<p><strong>Part 2.<\/strong><\/p>\n<p>Many experiments are inspired by patterns (or the lack of pattern) from previous observations or experiments. Using your findings\/results\/questions from part 1, design an experiment, observational study (or some kind of hybrid) to address your original question or address a new question that arose during the course of your study. This experiment can be as elaborate and complex as you\u2019d like it to be, as long as it *could* be achieved and allows you to address the question you pose. Consult the literature to see what kinds of experiments already exist and what evidence may already exist to support your hypothesis.<\/p>\n<p>6. Describe the knowledge gap or surprise (i.e. what your analysis did or did not show, or what the literature lacks)<\/p>\n<p>7. State (or restate) your question and hypothesis<\/p>\n<p>8. Design and experiment or study to address this question<\/p>\n<p>Add these components to Part 1 and turn in one paper (~3 pages), and give one presentation (5 min) of your journey of discovery. Due on November 3<sup>rd<\/sup>.<\/p>\n<\/div><\/div><\/div><\/div><div id=\"pg-225-1\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-1\" ><div id=\"pgc-225-1-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-1-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"1\" ><div class=\"textwidget\"><h3>Date<\/h3>\n<\/div><\/div><\/div><div id=\"pgc-225-1-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-1-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"2\" ><div class=\"textwidget\"><h3>Topic and Activity<\/h3>\n<\/div><\/div><\/div><div id=\"pgc-225-1-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-1-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"3\" ><div class=\"textwidget\"><h3>Readings and homework<\/h3>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-225-2\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-2\" ><div id=\"pgc-225-2-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-2-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"4\" ><div class=\"textwidget\"><p>Tuesday Oct 20<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-2-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-2-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"5\" ><div class=\"textwidget\"><p>Introduction to module and BEF<\/p>\n<p>Discussion of Tilman et al. 2014<\/p>\n<p><a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/ECOL-8000-BEF-Module.pptx\">ECOL 8000- BEF Module<\/a><\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-2-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-2-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"6\" ><div class=\"textwidget\"><p>Read prior to class and come ready to discuss:<\/p>\n<p><a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2019\/09\/Tilman-et-al.-2014-AREES.pdf\">Tilman et al. 2014<\/a><\/p>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-225-3\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-3\" ><div id=\"pgc-225-3-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-3-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"7\" ><div class=\"textwidget\"><p>Thursday Oct 22<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-3-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-3-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"8\" ><div class=\"textwidget\"><p>Discussion of the BEF debate.<\/p>\n<p>Introduce Assignment<\/p>\n<p><a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2020\/10\/ECOL-8000-BEF-debate.pptx\">ECOL 8000 - BEF debate<\/a><\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-3-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-3-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"9\" ><div class=\"textwidget\"><p>Read prior to class and come ready to discuss:<\/p>\n<p><a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2019\/09\/Wardle-2016-Journal_of_Vegetation_Science.pdf\">Wardle 2016<\/a><\/p>\n<p><a href=\"http:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-content\/uploads\/sites\/33\/2019\/09\/Eisenhauer_et.al_2016.pdf\">Eisenhauer et al. 2016<\/a><\/p>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-225-4\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-4\" ><div id=\"pgc-225-4-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-4-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"10\" ><div class=\"textwidget\"><p>Tuesday Oct 27<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-4-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-4-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"11\" ><div class=\"textwidget\"><p>Work on assignment in groups (Part 1)<\/p>\n<p>Feedback from Nina and JP<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-4-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-4-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"12\" ><div class=\"textwidget\"><p>Work on assignment<\/p>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-225-5\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-5\" ><div id=\"pgc-225-5-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-5-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"13\" ><div class=\"textwidget\"><p>Thursday Oct 29<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-5-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-5-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"14\" ><div class=\"textwidget\"><p>Work on assignment in groups (Part 2)<\/p>\n<p>Feedback from Nina and JP<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-5-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-5-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"15\" ><div class=\"textwidget\"><p>Work on assignment<\/p>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-225-6\"  class=\"panel-grid panel-has-style\" ><div class=\"panel-row-style panel-row-style-for-225-6\" ><div id=\"pgc-225-6-0\"  class=\"panel-grid-cell\" ><div id=\"panel-225-6-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"16\" ><div class=\"textwidget\"><p>Tuesday Nov 3<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-6-1\"  class=\"panel-grid-cell\" ><div id=\"panel-225-6-1-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"17\" ><div class=\"textwidget\"><p>Presentations of your findings and class discussion<\/p>\n<\/div><\/div><\/div><div id=\"pgc-225-6-2\"  class=\"panel-grid-cell\" ><div id=\"panel-225-6-2-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"18\" ><div class=\"textwidget\"><p><strong>Due: 3 page paper <\/strong>and ~5-10 minute presentation<\/p>\n<\/div><\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>In this module, we will explore the links between biodiversity and the ecosystem. In doing this, we will also practice methods of scientific inquiry, moving from theory or observation to a question and hypothesis and the design of an experiment. We will begin with discussions of BEF, including a history of the field and the <a class=\"moretag\" href=\"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/inference-module\/biodiversity-and-ecosystem-function\/\">Read More &#8230;<\/a><\/p>\n","protected":false},"author":4,"featured_media":0,"parent":43,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"full-width-page.php","meta":{"footnotes":""},"class_list":["post-225","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/pages\/225","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/comments?post=225"}],"version-history":[{"count":68,"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/pages\/225\/revisions"}],"predecessor-version":[{"id":1566,"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/pages\/225\/revisions\/1566"}],"up":[{"embeddable":true,"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/pages\/43"}],"wp:attachment":[{"href":"https:\/\/courses.ecology.uga.edu\/ecol8000-fall2020\/wp-json\/wp\/v2\/media?parent=225"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}