1. Lloyd-Smith JO, et al. (2005) Should we expect population thresholds for wildlife disease? Trends Ecol Evol 20(9):511–519.

2. Metcalf CJE, Ferrari M, Graham AL, Grenfell BT (2015) Understanding herd immunity. Trends in Immunology 36:753–755.

3. Ferrari MJ, Grenfell BT, Strebel PM (2013) Think globally, act locally: The role of local demographics and vaccination coverage in the dynamic response of measles infection to control. Philos Trans R Soc Lond B Biol Sci 368(1623):20120141.

4. Metcalf CJE, Hampson K, Tatem AJ, Grenfell BT, Bjørnstad ON (2013) Persistence in epidemic metapopulations: Quantifying the rescue effects for measles, mumps, rubella and whooping cough. PLoS One 8(9):e74696.

5. Grais RF, et al. (2006) Estimating transmission intensity for a measles epidemic in Niamey, Niger: Lessons for intervention. Trans R Soc Trop Med Hyg 100(9):867–873.

6. Rhodes-and-Anderson-1996.pdf.

7. Jansen VAA, et al. (2003) Measles outbreaks in a population with declining vaccine uptake. Science 301.

8. Yakob L, Clements ACA (2013) A mathematical model of chikungunya dynamics and control: The major epidemic on Réunion Island.

9. Drake JM, Beier JC (2014) Ecological niche and potential distribution of Anopheles Arabiensis in Africa in 2050. Malar J 13:213.

10. WHO-VMI Dengue Vaccine Modeling Group, et al. (2012) Assessing the potential of a candidate dengue vaccine with mathematical modeling. PLoS Negl Trop Dis 6(3):e1450.

11. Ferguson NM, et al. (2016) Benefits and risks of the Sanofi-Pasteur dengue vaccine: Modeling optimal deployment. Science 353(6303):1033–1036.

12. Dobson A (2004) Population dynamics of pathogens with multiple host species. Am Nat 164 Suppl 5:S64–78.

13. Magori K, Bajwa WI, Bowden S, Drake JM (2011) Decelerating spread of west nile virus by percolation in a heterogeneous urban landscape. PLoS Comput Biol 7(7):e1002104.

14. LaDeau SL, Kilpatrick AM, Marra PP (2007) West Nile virus emergence and large-scale declines of north american bird populations. Nature 447(7145):710–713.

15. Handel A, Akin V, Pilyugin SS, Zarnitsyna V, Antia R (2014) How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example. J R Soc Interface 11(92):20131083.

16. Lessler J, et al. (2012) Evidence for antigenic seniority in influenza a (H3N2) antibody responses in southern China. PLoS Pathog 8(7):e1002802.

17. Bedford T, et al. (2014) Integrating influenza antigenic dynamics with molecular evolution. Elife 3:e01914.

18. Roche B, et al. (2014) Adaptive evolution and environmental durability jointly structure phylodynamic patterns in avian influenza viruses. PLoS Biol 12(8):e1001931.

19. Barton HD, Rohani P, Stallknecht DE, Brown J, Drake JM (2014) Subtype diversity and reassortment potential for co-circulating avian influenza viruses at a diversity hot spot. J Anim Ecol 83(3):566–575.